ID 327638 - Incorrect Node Graph Connections when loading Large spread out script into Nuke

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Problem summary
When saving scripts which use NukeX Nodes, connected via 'Dot' and 'Merge' nodes, opening the saved project may cause connections to break.

This issue appears to be caused by the warning dialog appearing mid-script load:
 
The problem can be worked around by closing and reopening the comp in the same window

Customer reported version
nuke.11.0v3

Customer reported platform
centos7

Steps to reproduce

1) Save your project in NukeX

2) Open your Project in Nuke

Result: Nuke will throw an exception and display the Dialog Box above
              Some connections may disconnect or switch inputs.
 
Actual Results:
 
Expected results:

 
Workaround
 
1) Open your script within Nuke
 
2) Close the script via 'File -> Close Comp'
 
3) Reopen the Comp via 'File -> Open Recent'
 

 
If the above workaround does not work, please try clearing your cache following the steps below:

1) Open your project with Nuke

2) Go to 'Cache -> Clear Cache'

3) Go to 'File -> Clear'

4) Reopen your file via 'File -> Open Recent'

Reproduced by support
This bug has been reproduced in:
Nuke11.3v2 - Windows 7 - Mac10.12 - CentOS6.9
Nuke11.1v1 - Windows 7 - Mac10.12 - CentOS6.9
Nuke11.0v3 - Windows 7 - Mac10.12 - CentOS6.9
Nuke11.0v1 - Windows 7
Nuke10.5v6 - Windows 7 - Mac10.12 - CentOS6.9
Nuke10.5v1 - Windows 7
Nuke10.0v6 - Windows 7 - Mac10.12 - CentOS6.9
Nuke10.0v1 - Windows 7
Nuke9.0v9 - Windows 7 - Mac10.12 - CentOS6.9
Nuke9.0v1 - Windows 7
Nuke8.0v7 - Windows 7 - Mac10.12 - CentOS6.9
Nuke8.0v4  - Windows 7 - Mac10.12 - CentOS6.9 - Regression
 
Unable to reproduce bug in:
Nuke8.0v3   - Windows 7 - Mac10.12 - CentOS6.9

Earliest version tested
- This issue no longer appears in this version and has regressed​

Expected behaviour
Connections should not change when opening a NukeX project in Nuke

Actual behaviour
Connections break when loading the script.

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